Ongoing list of UCSF COVID-19 Publications
COVID-19 related literature by UCSF authors.
Recent "Hot Pubs"
Based on UCSF COVID-19 papers from the past 28 days, with Altmetric score of 20+ or citation count 1+. Papers may include some non-peer-reviewed preprints, and are sorted by the date first seen. Developed by CTSI's Research Technology team, using data from Dimensions and UCSF Profiles.
August 16, 2022
“Relations of Current and Past Cancer with Severe Outcomes among 104,590 Hospitalized COVID-19 Patients: The COVID EHR Cohort at the University of Wisconsin”
in Cancer Epidemiology Biomarkers & Prevention (August 15, 2022)
Altmetric score = 34
1 of 52 authors are from UCSF: Patrick K. Ha
August 12, 2022
“A single-administration therapeutic interfering particle reduces SARS-CoV-2 viral shedding and pathogenesis in hamsters” [preprint]
in bioRxiv (August 11, 2022)
Altmetric score = 34
6 of 11 authors are from UCSF: Sonali Chaturvedi, Michael Pablo, Gustavo Vasen, Xinyue Chen, Giuliana Calia, Leor S. Weinberger
August 11, 2022
“Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps” [preprint]
in bioRxiv (August 10, 2022)
Altmetric score = 23
24 of 25 authors are from UCSF: Soumya G. Remesh, Gregory E. Merz, Axel F. Brilot, Un Seng Chio, Alexandrea N. Rizo, Thomas H. Pospiech, Irene Lui, Mathew T. Laurie, Jeff Glasgow, Chau Q. Le, Yun Zhang, Devan Diwanji, Evelyn Hernandez, Jocelyne Lopez, Komal Ishwar Pawar, Sergei Pourmal, Amber M. Smith, Fengbo Zhou, Joseph DeRisi, Tanja Kortemme, Oren S. Rosenberg, Kevin K. Leung, James A. Wells, Kliment A. Verba
August 10, 2022
“SARS-CoV-2 hybrid immunity: silver bullet or silver lining?”
in Nature Reviews Immunology (August 09, 2022)
Altmetric score = 278
2 of 2 authors are from UCSF: Rahul Suryawanshi, Melanie Ott
August 10, 2022
“Infectiousness of SARS-CoV-2 breakthrough infections and reinfections during the Omicron wave” [preprint]
in medRxiv (August 09, 2022)
Altmetric score = 48
7 of 8 authors are from UCSF: Sophia T. Tan, Ada T. Kwan, Isabel Rodríguez-Barraquer, Benjamin J. Singer, Hailey J. Park, David Sears, Nathan C. Lo
August 09, 2022
“Efficacy and Safety of Ensovibep for Adults Hospitalized With COVID-19”
in Annals of Internal Medicine (August 09, 2022)
Altmetric score = 51
Times cited = 1
3 of 105 authors are from UCSF: Eyad Almasri, Alyssa Hughes, Michael Matthay
August 09, 2022
“Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study”
in EBioMedicine (August 08, 2022)
Altmetric score = 29
2 of 339 authors are from UCSF: Carolyn S. Calfee, David J. Erle
August 06, 2022
“Seroprevalence and infection fatality rate of the SARS-CoV-2 Omicron variant in Denmark: A nationwide serosurveillance study”
in The Lancet Regional Health - Europe (August 05, 2022)
Altmetric score = 126
1 of 27 authors are from UCSF: Michael P. Busch
August 04, 2022
“A first update on mapping the human genetic architecture of COVID-19”
in Nature (August 03, 2022)
Altmetric score = 201
1 of 11 authors are from UCSF: Sulggi Lee
August 04, 2022
“An intranasal ASO therapeutic targeting SARS-CoV-2”
in Nature Communications (August 03, 2022)
Altmetric score = 86
1 of 23 authors are from UCSF: Charles Chiu
August 03, 2022
“The Impact Of COVID-19 On The Health Of Incarcerated Older Adults In California State Prisons”
in Health Affairs (August 01, 2022)
Altmetric score = 26
4 of 5 authors are from UCSF: Ada Kwan, Ilana Garcia-Grossman, David Sears, Brie A Williams
July 31, 2022
“Evaluation of transplacental transfer of mRNA vaccine products and functional antibodies during pregnancy and infancy”
in Nature Communications (July 30, 2022)
Altmetric score = 47
20 of 20 authors are from UCSF: Mary Prahl, Yarden Golan, Arianna G. Cassidy, Yusuke Matsui, Lin Li, Bonny Alvarenga, Hao Chen, Unurzul Jigmeddagva, Christine Y. Lin, Veronica J. Gonzalez, Megan A. Chidboy, Lakshmi Warrier, Sirirak Buarpung, Amy P. Murtha, Valerie J. Flaherman, Warner C. Greene, Alan H. B. Wu, Kara L. Lynch, Jayant Rajan, Stephanie L. Gaw
July 28, 2022
“Association of Shelter-in-Place Hotels With Health Services Use Among People Experiencing Homelessness During the COVID-19 Pandemic”
in JAMA Network Open (July 01, 2022)
Altmetric score = 186
Times cited = 1
6 of 7 authors are from UCSF: Jennifer L. Evans, Dave Graham-Squire, Caroline Cawley, Hemal K. Kanzaria, Margot B. Kushel, Maria C. Raven
July 27, 2022
“Association between long-term exposure to particulate air pollution with SARS-CoV-2 infections and COVID-19 deaths in California, U.S.A.”
in Environmental Advances (July 26, 2022)
Altmetric score = 61
5 of 11 authors are from UCSF: Julie Von Behren, John R Balmes, John Boscardin, Debbie E Goldberg, Peggy Reynolds
July 27, 2022
“Continuous heart rate dynamics preceding in-hospital pulseless electrical activity or asystolic cardiac arrest of respiratory etiology”
in Resuscitation (July 26, 2022)
Altmetric score = 22
1 of 7 authors are from UCSF: Randall Lee
Previous biweekly report
August 10, 2022
“SARS-CoV-2 hybrid immunity: silver bullet or silver lining?”
in Nature Reviews Immunology (August 09, 2022)
Altmetric score = 234
2 of 2 authors are from UCSF: Rahul Suryawanshi, Melanie Ott
August 09, 2022
“Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study”
in EBioMedicine (August 08, 2022)
Altmetric score = 24
2 of 339 authors are from UCSF: Carolyn S. Calfee, David J. Erle
August 06, 2022
“Seroprevalence and infection fatality rate of the SARS-CoV-2 Omicron variant in Denmark: A nationwide serosurveillance study”
in The Lancet Regional Health - Europe (August 05, 2022)
Altmetric score = 120
1 of 27 authors are from UCSF: Michael P. Busch
August 05, 2022
“BNT162b2 mRNA Vaccination Against COVID-19 is Associated with Decreased Likelihood of Multisystem Inflammatory Syndrome in U.S. Children Ages 5-18 Years.”
in Clinical Infectious Diseases (August 04, 2022)
Altmetric score = 269
2 of 42 authors are from UCSF: Natalie Z Cvijanovich, Matt S Zinter
August 04, 2022
“A first update on mapping the human genetic architecture of COVID-19”
in Nature (August 03, 2022)
Altmetric score = 186
1 of 11 authors are from UCSF: Sulggi Lee
August 04, 2022
“An intranasal ASO therapeutic targeting SARS-CoV-2”
in Nature Communications (August 03, 2022)
Altmetric score = 84
1 of 23 authors are from UCSF: Charles Chiu
July 31, 2022
“Evaluation of transplacental transfer of mRNA vaccine products and functional antibodies during pregnancy and infancy”
in Nature Communications (July 30, 2022)
Altmetric score = 47
20 of 20 authors are from UCSF: Mary Prahl, Yarden Golan, Arianna G. Cassidy, Yusuke Matsui, Lin Li, Bonny Alvarenga, Hao Chen, Unurzul Jigmeddagva, Christine Y. Lin, Veronica J. Gonzalez, Megan A. Chidboy, Lakshmi Warrier, Sirirak Buarpung, Amy P. Murtha, Valerie J. Flaherman, Warner C. Greene, Alan H. B. Wu, Kara L. Lynch, Jayant Rajan, Stephanie L. Gaw
July 28, 2022
“Association of Shelter-in-Place Hotels With Health Services Use Among People Experiencing Homelessness During the COVID-19 Pandemic”
in JAMA Network Open (July 01, 2022)
Altmetric score = 185
Times cited = 1
6 of 7 authors are from UCSF: Jennifer L. Evans, Dave Graham-Squire, Caroline Cawley, Hemal K. Kanzaria, Margot B. Kushel, Maria C. Raven
July 27, 2022
“Association between long-term exposure to particulate air pollution with SARS-CoV-2 infections and COVID-19 deaths in California, U.S.A.”
in Environmental Advances (July 26, 2022)
Altmetric score = 61
5 of 11 authors are from UCSF: Julie Von Behren, John R Balmes, John Boscardin, Debbie E Goldberg, Peggy Reynolds
July 27, 2022
“Continuous heart rate dynamics preceding in-hospital pulseless electrical activity or asystolic cardiac arrest of respiratory etiology”
in Resuscitation (July 26, 2022)
Altmetric score = 22
1 of 7 authors are from UCSF: Randall Lee
July 23, 2022
“Post-acute sequelae and adaptive immune responses in people living with HIV recovering from SARS-COV-2 infection.”
in AIDS (July 19, 2022)
Altmetric score = 50
Times cited = 2
26 of 32 authors are from UCSF: Michael J Peluso, Matthew A Spinelli, Tyler-Marie Deveau, Carrie A Forman, Sadie E Munter, Sujata Mathur, Alex F Tang, Scott Lu, Sarah A Goldberg, Mireya I Arreguin, Rebecca Hoh, Viva Tai, Jessica Y Chen, Enrique O Martinez, Nitasha Kumar, Kara L Lynch, Peter W Hunt, Matthew S Durstenfeld, Priscilla Y Hsue, J Daniel Kelly, Jeffrey N Martin, David V Glidden, Monica Gandhi, Steven G Deeks, Rachel L Rutishauser, Timothy J Henrich
July 23, 2022
“Emergency department personnel patient care-related COVID-19 risk”
in PLOS ONE (July 22, 2022)
Altmetric score = 57
1 of 14 authors are from UCSF: Juan Carlos C. Montoy
July 22, 2022
“Impact of sleep duration on the response to vaccination: A meta-analysis”
in Sleep Medicine (July 21, 2022)
Altmetric score = 38
1 of 8 authors are from UCSF: A. Prather
July 21, 2022
“Omicron mutations enhance infectivity and reduce antibody neutralization of SARS-CoV-2 virus-like particles”
in Proceedings of the National Academy of Sciences of the United States of America (July 19, 2022)
Altmetric score = 694
Times cited = 6
12 of 21 authors are from UCSF: Abdullah M. Syed, Alison Ciling, Taha Y. Taha, Irene P. Chen, Mir M. Khalid, Bharath Sreekumar, Pei-Yi Chen, G. Renuka Kumar, Rahul Suryawanshi, Takako Tabata, Melanie Ott, Jennifer A. Doudna
July 21, 2022
“Adeno-associated virus 2 infection in children with non-A-E hepatitis” [preprint]
in medRxiv (July 19, 2022)
Altmetric score = 2086
Times cited = 3
1 of 39 authors are from UCSF: Jill Hollenbach
July 19, 2022
“Systematic functional interrogation of SARS-CoV-2 host factors using Perturb-seq” [preprint]
in bioRxiv (July 17, 2022)
Altmetric score = 30
Times cited = 1
10 of 18 authors are from UCSF: Sara Sunshine, Joseph M. Replogle, Matthew T. Laurie, Jamin Liu, Beth Shoshana Zha, James K. Nuñez, Juliane Winkler, Oren S. Rosenberg, Chun Jimmie Ye, Joseph L. DeRisi
July 19, 2022
“Could Repeated Cardio-Renal Injury Trigger Late Cardiovascular Sequelae in Extreme Endurance Athletes?”
in Sports Medicine (July 18, 2022)
Altmetric score = 7
Times cited = 1
1 of 8 authors are from UCSF: Matthieu Legrand