Ongoing list of UCSF COVID-19 Publications

COVID-19 related literature by UCSF authors.
 

Recent "Hot Pubs"

Based on UCSF COVID-19 papers from the past 30 days, sampled quarterly, with Altmetric score of 20+ or citation count 1+. Papers may include some non-peer-reviewed preprints, and are sorted by the date first seen. Developed by CTSI's Research Technology team, using data from Dimensions and UCSF Profiles.

August 14, 2025
“Dalbavancin for Treatment of Staphylococcus aureus Bacteremia”
in JAMA (August 13, 2025)
Altmetric score = 295
Times cited = 2
2 of 81 authors are from UCSF: Sarah B. Doernberg, Henry F. Chambers

August 09, 2025
“Variability in Long COVID Definitions and Validation of Published Prevalence Rates”
in JAMA Network Open (August 01, 2025)
Altmetric score = 281
1 of 88 authors are from UCSF: Juan Carlos C. Montoy

August 09, 2025
“Work Impairment and Financial Outcomes Among Adults With vs Without Long COVID”
in JAMA Network Open (August 01, 2025)
Altmetric score = 210
3 of 91 authors are from UCSF: Robert Rodriguez, Juan Carlos C. Montoy, Ralph C. Wang

August 09, 2025
“Emergency Department Survey of Vaccination Knowledge, Vaccination Coverage, and Willingness to Receive Vaccines in an Emergency Department Among Underserved Populations — Eight U.S. Cities, April–December, 2024”
in MMWR Morbidity and Mortality Weekly Report (August 07, 2025)
Altmetric score = 166
4 of 16 authors are from UCSF: Brian Chinnock, Perla Gomez, Christopher Alvarez, Melanie F. Molina

August 05, 2025
“2025 Clinical Practice Guideline Update by the Infectious Diseases Society of America on the Treatment and Management of COVID-19: Pemivibart for Pre-exposure Prophylaxis, Vilobelimab for Critical Illness, and Abatacept or Infliximab for Severe or Critical Illness”
in Clinical Infectious Diseases (August 04, 2025)
Altmetric score = 21
2 of 29 authors are from UCSF: David V Glidden, Phyllis C Tien

August 02, 2025
“Reform and Remedy for Imprecision and Inequity — Ending the Race-Based Evaluation of Occupational Pulmonary Impairment”
in New England Journal of Medicine (July 31, 2025)
Altmetric score = 52
1 of 4 authors are from UCSF: Nirav R Bhakta

July 31, 2025
“Social Determinants of Health and Risk for Long COVID in the U.S. RECOVER-Adult Cohort.”
in Annals of Internal Medicine (July 29, 2025)
Altmetric score = 197
6 of 63 authors are from UCSF: J Daniel Kelly, Valerie J Flaherman, Vanessa Jacoby, Jeffrey N Martin, Megumi J Okumura, Michael J Peluso

July 31, 2025
“Peripheral immune progression to long COVID is associated with mitochondrial gene transcription: A meta-analysis”
in Mitochondrion (July 28, 2025)
Altmetric score = 140
3 of 7 authors are from UCSF: David P Maison, Michael J Peluso, Timothy J Henrich

July 25, 2025
“Risk of neuropsychiatric and related conditions associated with SARS-CoV-2 infection: a difference-in-differences analysis”
in Nature Communications (July 24, 2025)
Altmetric score = 222
Times cited = 1
1 of 30 authors are from UCSF: Susan Kim

July 25, 2025
“Effects of long COVID on healthcare utilization”
in PLOS ONE (July 23, 2025)
Altmetric score = 42
2 of 23 authors are from UCSF: Juan Carlos C. Montoy, Ralph C. Wang

Previous reports

July 19, 2025
“Global epidemiology and burden of interstitial lung disease”
in The Lancet Respiratory Medicine (July 14, 2025)
Altmetric score = 4
Times cited = 1
1 of 13 authors are from UCSF: Bhavika Kaul

July 17, 2025
“Evaluating the generalisability of formulas used to set tidal volumes in mechanically ventilated patients: an observational, multicohort, retrospective study”
in The Lancet Respiratory Medicine (July 15, 2025)
Altmetric score = 3
Times cited = 1
5 of 5 authors are from UCSF: Aartik Sarma, Kathryn M Sullivan, Aaron D Baugh, Nirav R Bhakta, Carolyn S Calfee

July 17, 2025
“The Sepsis Chain of Survival: A Comprehensive Framework for Improving Sepsis Outcomes.”
in Critical Care Medicine (July 16, 2025)
Altmetric score = 21
1 of 15 authors are from UCSF: Teresa Kortz

July 11, 2025
“Ion channel structure and function of the MERS coronavirus E protein”
in Science Advances (July 09, 2025)
Altmetric score = 13
Times cited = 1
1 of 9 authors are from UCSF: Hyunil Jo

July 10, 2025
“Sutezolid in combination with bedaquiline, delamanid, and moxifloxacin for pulmonary tuberculosis (PanACEA-SUDOCU-01): a prospective, open-label, randomised, phase 2b dose-finding trial”
in The Lancet Infectious Diseases (July 08, 2025)
Altmetric score = 68
Times cited = 2
2 of 105 authors are from UCSF: Brian H Aldana, Patrick P J Phillips

June 29, 2025
“The Effect of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Reinfection on Long-Term Symptoms in the Innovative Support for Patients With SARS-CoV-2 Infections Registry (INSPIRE)”
in Clinical Infectious Diseases (June 18, 2025)
Altmetric score = 70
1 of 23 authors are from UCSF: Ralph C Wang

June 29, 2025
“Threats to Vaccinations in the US”
in JAMA Health Forum (June 07, 2025)
Altmetric score = 22
1 of 2 authors are from UCSF: Dorit Reiss

June 13, 2025
“Association of SARS-CoV-2 With Health-related Quality of Life 1 Year After Illness Using Latent Transition Analysis”
in Open Forum Infectious Diseases (May 31, 2025)
Altmetric score = 153
Times cited = 1
1 of 22 authors are from UCSF: Juan Carlos C Montoy

May 30, 2025
“Exploration of structure-activity relationships for the SARS-CoV-2 macrodomain from shape-based fragment linking and active learning”
in Science Advances (May 28, 2025)
Altmetric score = 3
Times cited = 2
11 of 19 authors are from UCSF: Galen J Correy, Moira M Rachman, Takaya Togo, Stefan Gahbauer, Yagmur U Doruk, Maisie G V Stevens, Priyadarshini Jaishankar, Alan Ashworth, Brian K Shoichet, Adam R Renslo, James S Fraser

May 29, 2025
“Pediatric Mental Health Boarding in US Emergency Departments, 2018-2022”
in Journal of the American College of Emergency Physicians Open (May 27, 2025)
Altmetric score = 296
1 of 10 authors are from UCSF: Ashley A. Foster

May 24, 2025
“Characterizing Long COVID Symptoms During Early Childhood”
in JAMA Pediatrics (May 27, 2025)
Altmetric score = 648
1 of 673 authors are from UCSF: Valerie J. Flaherman

May 24, 2025
“Global, Regional, and National Burden of Nontraumatic Subarachnoid Hemorrhage”
in JAMA Neurology (May 23, 2025)
Altmetric score = 122
3 of 673 authors are from UCSF: Jean Jacques Noubiap, Masayuki Teramoto, Michael Zastrozhin

May 22, 2025
“Genome-wide association study of long COVID”
in Nature Genetics (May 21, 2025)
Altmetric score = 427
2 of 162 authors are from UCSF: Maria Sophia Donaire, Sannidhi Sarvadhavabhatla

May 22, 2025
“Minimalistic Transcriptomic Signatures Permit Accurate Early Prediction of COVID-19 Mortality” [preprint]
in medRxiv (May 19, 2025)
Altmetric score = 27
14 of 41 authors are from UCSF: Rithwik Narendra, Emily C. Lydon, Hoang Van Phan, Natasha Spottiswoode, Lucile P. Neyton, Walter Eckalbar, Sidney A. Carillo, David Erle, Carolyn M. Hendrickson, Matthew F. Krummel, Michael A. Matthay, Prescott Woodruff, Carolyn S. Calfee, Charles R. Langelier

May 21, 2025
“The 2022 ADEA Climate Study in US and Canadian Dental Schools and Allied Dental Programs—Preliminary Research”
in Journal of Dental Education (May 20, 2025)
Times cited = 6
1 of 16 authors are from UCSF: George W. Taylor

May 17, 2025
“Safety and broad immunogenicity of HIVconsvX conserved mosaic candidate T-cell vaccines vectored by ChAdOx1 and MVA in HIV-CORE 006: a double-blind, randomised, placebo-controlled phase 1 trial in healthy adults living without HIV-1 in eastern and southern Africa”
in The Lancet Microbe (May 16, 2025)
Altmetric score = 106
1 of 75 authors are from UCSF: Rachel L Rutishauser

May 14, 2025
“Association of Pre-COVID Fitness With Post-COVID Fitness and Long COVID in the Cooper Center Longitudinal Cohort Study.”
in Journal of the American Heart Association (May 13, 2025)
Altmetric score = 50
2 of 11 authors are from UCSF: Matthew S Durstenfeld, Michael J Peluso